I configured the Header Area with my personal logo. That works great.

Below the Header Area, there is the Header Image section using a Image Randomizer based on images in the 'themes/atahualpa/images/header' folder.

How do I use this space for JavaScript Code to call OpenX Ad Rotator code? This will allow me to have an ad campaign with different links instead of always to my site homepage.

if you look thru the forums you will find out how others have added AD's to the header area. If you have a specific question implimenting one of those methods, feel free to ask about it.